Club MEG: Difference between revisions

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Interested in presenting a topic? Email '''Fred Carver at carverf@nih.gov''' or '''Jeff Stout at stoutjd@nih.gov''' if you would like to present.
Interested in presenting a topic? Email '''Fred Carver at carverf@nih.gov''' or '''Jeff Stout at stoutjd@nih.gov''' if you would like to present.


Notifications of upcoming talks are sent to the [https://list.nih.gov/cgi-bin/wa.exe?A0=meg_announce MEG_ANNOUNCE] listserv.
Notifications of upcoming talks are sent to the [https://list.nih.gov/cgi-bin/wa.exe?A0=meg_announce MEG_ANNOUNCE (NIH MEG Core Users only)] and [https://list.nih.gov/cgi-bin/wa.exe?SUBED1=CLUB-MEG_ANNOUNCE&A=1 Club-MEG_ANNOUNCE] listservs.



== Upcoming Talks/Discussions ==
== Upcoming Talks/Discussions ==
* '''05/24/2024 at 11:00am''' FAES classrooms Building 10
⚫
* '''02/03/2023 at 1:00pm''' Club MEG: Lina Teichman and Amaia Benitez Andonegui - The temporal evolution of colour-space geometries in the human brain
** Tijl Grootswagers : Seeing in a Flash: Neural Decoding of Rapid Object Recognition
* '''02/17/2023 at 1:00pm''' Club MEG: Gustavo Sudre
* '''05/24/2024 at 1:00pm''' 2X Journal Article
⚫
* '''02/24/2023 at 10:00am''' Club MEG: Georgios Michalareas (Max Planck Institute) - [https://www.sciencedirect.com/science/article/pii/S0896627315011204?via%3Dihub Alpha-Beta and Gamma Rhythms Subserve Feedback and Feedforward Influences among Human Visual Cortical Areas]
** Lucrezia
* '''03/03/2023 at 1:00pm''' Club MEG: Graham Flick (New York University)
** Anna
⚫
* '''04/07/2023 at 1:00pm''' Club MEG: Abbas Babajani-Feremi - (University of Florida). MEG Presurgical Language Mapping Using a Novel Automatic Equivalent Current Dipole Algorithm (AsECDa) in Comparison with MNE, dSPM, and DICS Beamformer
* '''05/??/2023''' MEG Hackathon 2023
* '''05/--/2024''' Possibly DC Brainhack
* '''06/14/2024'''
⚫
* '''08/18/2023 at 1:00pm''' Club MEG: Arshitha Basavaraj and Jeff Stout - Curating / Uploading / Editing / Versioning MEG BIDS data for OpenNeuro
** Jess
** Sebastian
* '''07/**/2024'''
** Allison
** Lindsay
* '''09/**/2024'''
** Ivano
** Carlos

</br>
Other notable dates:</br>
<!-- Note to self: Don't schedule during these times: -->
'''OHBM:''' 06/(23 - 27)/2024 </br>
'''BIOMAG''' 08/(26 – 29)/2024 </br>


== Recent Talks/Discussions ==
== Recent Talks/Discussions ==
* '''04/19/2024 at 1:00pm''' 2X Journal Article
** Shruti
*** [https://pubmed.ncbi.nlm.nih.gov/37365829/ Objects sharpen visual scene representations: evidence from MEG decoding]
** Ryan
*** [https://www.biorxiv.org/content/10.1101/2023.06.23.546249v2.full.pdf An adversarial collaboration to critically evaluate theories of consciousness ]
* '''03/08/2024 at 1:00pm''' 2X Journal Article
** Shivam Bansal
*** [https://www.ncbi.nlm.nih.gov/pmc/articles/PMC10902297/pdf/42003_2024_Article_5927.pdf Linking structural and functional changes during aging using multilayer brain network analysis ]
** Amaia Benitez Andonegui
*** [https://www.pnas.org/doi/full/10.1073/pnas.1508523113 Brain responses in humans reveal ideal observer-like sensitivity to complex acoustic patterns]
* '''02/23/2024''' Yoojin Lee - Dysregulated connectivity among insula, postcentral gyrus, and precuneus and its association with suicide risk
* '''02/16/2024''' 2X Journal Article
** Fred Carver
*** [https://www.biomedcentral.com/epdf/10.1186/s12984-015-0076-7?sharing_token=mkccASrrnNz9b8w0BMAJ82_BpE1tBhCbnbw3BuzI2RNVoDKPinmyo4Rqp7Gjl8B4zqtKDO-MMrgZh-FgW06gwuL_Dl39uXBVRbbC4vqoHXQJBKV6_KXny6x6KAlhDvqL4tZzdevxq1WLF85j0Mafb7m5Aoq0vs43lwARUHXqlYA%3D MEG-based neurofeedback for hand rehabilitation ]
** Jeff Stout
*** [https://www.sciencedirect.com/science/article/pii/S105381192200492X The natural frequencies of the resting human brain ]
* '''01/26/2024''' Megan Parker - A smartphone delivered attention retraining intervention for altering neural underpinnings of food attention bias in adolescent girls with overweight or obesity
* '''11/08/2023-11/09/2023''' MEG North America (at NIH campus) - https://megcore.nih.gov/index.php/MEG_North_America_Workshop
* '''10/20/2023''' Club MEG: (Multi-Presenter: 3x 15min talks)
** Elena Hayday
*** [https://www.sciencedirect.com/science/article/pii/S138824572300737X?casa_token=lP2ya9xhlBQAAAAA:7vx20m6eqPwKvc90PtswFxeZaVrYEklGAMg46guMAzy5fb_uDtMkA-HhcZAftdmFI6I2wQ Language MEG predicts postoperative verbal memory change in left mesial temporal lobe epilepsy]
** Pei Robins
*** [https://www.jneurosci.org/content/jneuro/42/47/8807.full.pdf Whole-Brain Propagation Delays in Multiple Sclerosis, a Combined Tractography-Magnetoencephalography Study]
** Amy Xu
*** [https://www.sciencedirect.com/science/article/pii/S0165032722011405?via%3Dihub Convergent and divergent cognitive impairment of unipolar and bipolar depression: A magnetoencephalography resting-state study]
* '''09/27(Wednesday) & 10/04/2023(Wednesday)'''
** [https://megcore.nih.gov/index.php/MEG_training_course_2023 MEG Training Course]
** [https://github.com/nih-megcore/MEG_workshop_2023 Code: Course Github Page]
⚫
* '''08/18/2023''' Arshitha Basavaraj and Jeff Stout - Curating / Uploading / Editing / Versioning MEG BIDS data for OpenNeuro
* '''08/04/2023''' Sue Tong and Daniel Eisenberg - Schizophrenia, antipsychotic treatment, and cortical function
* '''07/28/2023''' Riley Hochstein - Magnetocardiography with OPMs
* '''06/30/2023''' Club MEG: (Multi-Presenter: 3x 15min talks)
**Sebastian Montesinos
***[https://elifesciences.org/articles/33904 Differential temporal dynamics during visual imagery and perception]
**Miguel Jaime
***[https://molecularautism.biomedcentral.com/articles/10.1186/s13229-022-00498-2 Globally elevated excitation–inhibition ratio in children with autism spectrum disorder and below-average intelligence]
**Bess Bloomer
***[https://www.sciencedirect.com/science/article/pii/S2213158223000530 Functional connectivity changes during working memory in autism spectrum disorder: A two-year longitudinal MEG study]
* '''05/19/2023''' Club MEG: (Multi-Presenter: 3X 15min talks)
**Angela Wang
***[https://www.ncbi.nlm.nih.gov/pmc/articles/PMC7342265/ Localization of Early-Stage Visual Processing Deficits at Schizophrenia Spectrum Illness Onset Using Magnetoencephalography ]
**Price Withers
***[https://www.sciencedirect.com/science/article/pii/S1053811921002007?via%3Dihub Dynamic analysis on simultaneous iEEG-MEG data via hidden Markov model]
**Kaya Scheman
***[https://www.sciencedirect.com/science/article/pii/S138824571830261X Advanced dynamic statistical parametric mapping with MEG in localizing epileptogenicity of the bottom of sulcus dysplasia]
* '''05/12/2023''' Christian Brodbeck (University of Connecticut) - Eelbrain Software Demonstration (for neurophysiological statistics)
**https://eelbrain.readthedocs.io/en/r-0.27/index.html
* '''05/05/2023''' -- [https://megcore.nih.gov/index.php/MEG_Hackathon_2023 '''MEG Hackathon 2023''']
** [https://github.com/nih-megcore/MEGHACK_2023_spring GitHub_Repos]
⚫
* '''04/28/2023 at 1:00pm''' Club MEG: Abbas Babajani-Feremi - (University of Florida) - ''MEG Presurgical Language Mapping Using a Novel Automatic Equivalent Current Dipole Algorithm (AsECDa) in Comparison with MNE, dSPM, and DICS Beamformer''
**[https://megcore.nih.gov/MEG/AbbasBabajani-Feremi_ClubMEG_04282023.mp4 Recording Download (mp4)]
* '''04/21/2023 at 1:00pm''' Hackathon Prep -- Go over ideas and best practices - setup git repos for the project.
**[https://megcore.nih.gov/index.php/MEG_Hackathon_2023 MEG Hackathon 2023 -- SIGN UP!]
* '''03/03/2023''' Graham Flick (New York University) - ''Visual word recognition in natural reading: A co-registered MEG and eye-tracking study''
⚫
* '''02/24/2023''' Georgios Michalareas (Max Planck Institute) - [https://www.sciencedirect.com/science/article/pii/S0896627315011204?via%3Dihub Alpha-Beta and Gamma Rhythms Subserve Feedback and Feedforward Influences among Human Visual Cortical Areas]
⚫
* '''02/03/2023''' Lina Teichman and Amaia Benitez Andonegui - The temporal evolution of colour-space geometries in the human brain
* '''01/27/2023''' Lucrezia Liuzzi - Identifying markers of cognitive control
* '''01/27/2023''' Lucrezia Liuzzi - Identifying markers of cognitive control
* '''12/09/2022''' Ryan Oakeson and Amaia Benitez, [https://www.biorxiv.org/content/10.1101/2022.05.31.494173v3 Top-down information flow drives lexical access when listening to continuous speech]
* '''12/09/2022''' Ryan Oakeson and Amaia Benitez, [https://www.biorxiv.org/content/10.1101/2022.05.31.494173v3 Top-down information flow drives lexical access when listening to continuous speech]
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== Previous Tutorials and Training ==
== Previous Tutorials and Training ==
* Jeff Stout (02/17/2023) - Making python modules
**
**[https://docs.python.org/3/distutils/setupscript.html Configuring a setup.py file ]
* Jeff Stout (10/21/2022) - MNE_BIDS/MNE_BIDS_PIPELINE/Biowulf MEG Bids Modules
* Jeff Stout (10/21/2022) - MNE_BIDS/MNE_BIDS_PIPELINE/Biowulf MEG Bids Modules
**[https://megcore.nih.gov/MEG/Stout_MNE-BIDStutorial_10212022.mp4 Recording Download (mp4)]
**[https://megcore.nih.gov/MEG/Stout_MNE-BIDStutorial_10212022.mp4 Recording Download (mp4)]

Latest revision as of 13:58, 23 April 2024

Club MEG is our version of a journal club. We welcome NIH MEG researchers to lead discussions on any MEG topic, including interesting papers, experiment ideas, analysis techniques, or finding from your research.

Interested in presenting a topic? Email Fred Carver at carverf@nih.gov or Jeff Stout at stoutjd@nih.gov if you would like to present.

Notifications of upcoming talks are sent to the MEG_ANNOUNCE (NIH MEG Core Users only) and Club-MEG_ANNOUNCE listservs.


Upcoming Talks/Discussions

  • 05/24/2024 at 11:00am FAES classrooms Building 10
    • Tijl Grootswagers : Seeing in a Flash: Neural Decoding of Rapid Object Recognition
  • 05/24/2024 at 1:00pm 2X Journal Article
    • Lucrezia
    • Anna
  • 05/--/2024 Possibly DC Brainhack
  • 06/14/2024
    • Jess
    • Sebastian
  • 07/**/2024
    • Allison
    • Lindsay
  • 09/**/2024
    • Ivano
    • Carlos


Other notable dates:
OHBM: 06/(23 - 27)/2024
BIOMAG 08/(26 – 29)/2024

Recent Talks/Discussions

Previous Tutorials and Training

Special Interest Groups

Machine Learning Special Interest Group (ML SIG) - 4th Friday of every month 1-2pm. Contact Jeff Stout for more information on joining or presenting.
Prior ML SIG topics:

References

  1. ↑ https://www.sciencedirect.com/science/article/pii/S2211124721005398?via%3Dihub Consolidation of human skill linked to waking hippocampo-neocortical replay Ethan R. Buch, Leonardo Claudino, Romain Quentin, Marlene Bönstrup, Leonardo Cohen
  2. ↑ https://github.com/hcps-ninds/Replay ANALYSIS CODE: Consolidation of human skill linked to waking hippocampo-neocortical replay
  3. ↑ Dash D, Ferrari P, Wang J. Decoding Imagined and Spoken Phrases From Non-invasive Neural (MEG) Signals. Front Neurosci. 2020;14:290. Published 2020 Apr 7. doi:10.3389/fnins.2020.00290
  4. ↑ Dash D, Wisler A, Ferrari P, Davenport EM, Maldjian J, Wang J. MEG Sensor Selection for Neural Speech Decoding. IEEE Access. 2020;8:182320-182337. doi:10.1109/access.2020.3028831
  5. ↑ Dash D, Ferrari P, Dutta S, Wang J. NeuroVAD: Real-Time Voice Activity Detection from Non-Invasive Neuromagnetic Signals. Sensors (Basel). 2020;20(8):2248. Published 2020 Apr 16. doi:10.3390/s20082248
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