Policies and Procedures: Difference between revisions
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There are two Gantry controls which are located on the side of the Gantry base: 1) the Brake Lever and 2) the Tilt Control Lever. The Gantry controls have been designed so that the operator is required to use two hands to operate. The Brake Lever and the Tilt Control Lever must be engaged more-or-less at the same time.
::::'''''Please note:'''''
::::::• Pulling up on the Brake Lever turns on the power and releases the brake.
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Revision as of 16:08, 11 May 2018
Policies and Procedures Manual
These documents comprise the official policies and procedures for the MEG lab.
- MEG Core Facility
Operations(1.00)
Hours of Operation
National Institute of Mental Health
Subject: |
Date: 1/03 |
Recommended By: |
Distribution: MEG Core Facility |
- 1) Normal hours of operations 9:00-5:00 pm Monday - Friday. The MEG Core Facility staff will be available to assist users during normal hours of operation.
- 2) Users may schedule scans for after hours provided they have received training and are capable of operating MEG equipment in accordance with MEG policies and procedures.
After hours use authorization must be obtained from MEG Core staff.
- 2) Users may schedule scans for after hours provided they have received training and are capable of operating MEG equipment in accordance with MEG policies and procedures.
Laboratory Access
National Institute of Mental Health
Subject: |
Date: 1/03 |
Recommended By: |
Distribution: MEG Core Facility |
- 1) MEG Users will be given the MEG Lab keyless entry code during the MEG Orientation Training class.
- 2) During Normal Hours of Operations- the MEG Lab may or may not be locked, however, if locked access may be gained / the door can be unlocked by using the access code.
- 3) After Normal Hours of Operations and on the weekends- the MEG Lab will be locked, however, access can be gained by using the keyless entry system.
- 4) All equipment, except for all computers (acquisition and workstation), must be powered off upon departure.
- 5) It will be the responsibility of the user to make sure the lab is locked upon departure.
Scheduling (2.00)
Scheduling
National Institute of Mental Health
Subject: |
Date: 1/03 |
Recommended By: |
Distribution: MEG Core Facility |
Procedure:
- I. Requesting Time -
- 1. Click on Login location near the bottom of the MEG Schedule/Calendar.
- 2. Enter “Username” and “Password”.
- 3. Click on Login.
- 4. On the calendar - Click on the at the day and time desired.
- 5. Enter the “Add Entry” form information –
- a. Investigator’s Name - enter the last name of the PI / last name of the person who is going to run the scan (acquisition computer). For example - BERMAN / J. Mitchell. In this case Dr. Berman is the PI and Judy Mitchell is running the scan.
- b. Description of experiment – provide a simple description
- c. Comments - Use this field to enter any private comments, subject name / phone number or MIS number. Information in this box will not appear on the published calendar. Important: ::::This box is for confidential information.
- d. Sensor position – Sitting or Supine.
- e. EEG electrodes – indicate whether EEG, EOG, EMG electrodes will be used.
- f. Date
- g. Time - military time.
- h. Duration – indicate how much time needed to complete your study. Please allow enough time for any possible delays (set up / prep time, subject late, equipment malfunction, etc.).
- i. Hold approval – only use holds if your subject needs to get back with you to confirm the appointment. Appointments can only be held for 2-3 days.
- j. Participants – DO NOT ALTER THIS FIELD (should always be admin for MEG staff who are doing the scheduling).
- k. Repeat Type – if a recurring appointment enter here; however, check with Staff Scientist before scheduling any repeats!
- l. Repeat End Date – *for recurring appointments only.
- m. Repeat Day (weekly) - *for recurring appointments only.
- n. Frequency – for recurring appointments only.
- 6. Click on “Save”.
- II. To Edit or Cancel an Appointment –
- a. Click on the login.
- b. Enter User Name and Password.
- c. Click on the entry to be changed (at the point where it gives the little popup detail description).
- d. Click on option: Edit entry, Delete entry, Add to My Calendar, etc.
*Please note: you must be the owner to be able to edit or delete an entry in the schedule.
- III. To Refresh the Calendar –
- 1. Click on My Calendar.
Facility Access Requests
National Institute of Mental Health
Subject: |
Date: 3/03 |
Recommended By: |
Distribution: MEG Core Facility |
Procedure:
- 1. A Facility Access Request (FAF) must be submitted electronically to become a MEG Lab user. The form may be accessed via the MEG Lab website at: http://kurage.nimh.nih.gov/meglab under User Information Becoming a User.
- 2. All the requested information must be provided, such as the protocol #, PI’s last name and the name of the person who be in the MEG Lab running the study. In addition, we must have a cell phone number so that we can contact you in an "emergency".
- 3. The username will be the user’s last name as entered on the Facility Access Form (FAF).
- 4. When a Facility Access Request Form is received the accounts administrator will assign an account and issue a temporary password.
- 5. An email notification of the account name and temporary password will be sent to each applicant.
- 6. User accounts may not be shared.
User / Subject Guidelines (3.00)
User Guidelines
National Institute of Mental Health
Subject: |
Date: 1/03 |
Recommended By: |
Distribution: MEG Core Facility |
Procedure:
- I. Becoming a User
- 1. Protocol Approval
- a. User groups are required to have an IRB approved protocol with a description of the intended MEG research before a user account ID or scanning time can be assigned.
- 1. Protocol Approval
- I. Becoming a User
- 2. User Accounts
- a. A Facility Access Request must be filled out electronically (http://kurage.nimh.nih.gov/meglab ) to establish a user account. Filling out this request will initiate the process of establishing a user account ID and password.
- 2. User Accounts
- b. The account ID and password will give users access to the scheduling calendar and provide access to the MEG Core Facility data storage system. All requests must be sent electronically.
- d. The account ID information will be emailed to the email address provided in the Facility Access Request Form, generally within 24 hours, if not call the Staff Engineer at 301/402-2362.
- 3. MEG Orientation
- a. Users must schedule / attend an informal MEG orientation to become familiar with the lab operations and equipment.
- 3. MEG Orientation
- b. Established users with new protocols will be required to complete a “new” Facility Access Request for each new protocol indicating the new protocol number.
- II. Initiating a MEG Study
- 1. Study Design Review
- a. Users must provide the director and/or staff scientist with a description of the research study design including information regarding setup requirements, software and equipment needs.
- 1. Study Design Review
- II. Initiating a MEG Study
- 2. System Testing / Task Setup
- a. Users must schedule a time to test their task / paradigm, equipment, software, etc. When scheduling indicate in the scheduling module that the appointment is for a “system test”.
- 2. System Testing / Task Setup
- b. Indicate whether programming or scripting support will be needed for the stimulus program.
- c. Also, indicate whether technical support is needed – i.e., training or assistance with EEG/EP electrode placement or setup. If you have a specific electrode setup or placement and require MEG Core staff assistance you must provide a detailed description of your setup.
- 3. Pilot Studies
- a. Most protocols will require a pilot study to test equipment, paradigms / programs and refine procedures with a test subject. Users must provide their own volunteer subject; if this is an external volunteer, he/she must be consented according to IRB guidelines.
- 3. Pilot Studies
- b. You must schedule time for the pilot study via the web calendar. Please indicate in the description that time is being requested for a “pilot study”.
- 4. User Training
- a. There is a three-step training program specifically designed so that users can acquire practical experience. The user is expected to become competent in performing all aspects of MEGs on their own subjects. MEG Core staff is available to provide training and technical assistance.
- 1. Instruction – (without a subject) MEG setup instructions and equipment operation.
- 2. Observation – (with a subject) instructions and observation of MEG setup and scan.
- 3. Practicum – hands on training session running a subject during a MEG scan.
- a. There is a three-step training program specifically designed so that users can acquire practical experience. The user is expected to become competent in performing all aspects of MEGs on their own subjects. MEG Core staff is available to provide training and technical assistance.
- 4. User Training
- b. User training must be scheduled via the web-based calendar. You must indicate in the description that this is MEG Training – Instruction, MEG Training-Observation, or MEG Training-Practicum. MEG staff will assist users during all phases of this training.
- 5. Scheduling Scan Time
- a. Scan time must be requested electronically via the web-based calendar at http://kurage.nimh.nih.gov/cal/. Currently scan time is scheduled on a first-come-first-served basis.
- 5. Scheduling Scan Time
- b. To Request Time – Enter User Name and Password; click on Login; enter form information; save.
- c. Approvals - All requests must be approved before they will go “live” on the public calendar. You will receive an email message notifying you that your time has been approved. All unapproved requests will appear in red.
- d. To Edit or Cancel an Appointment –
- • Enter User Name and Password; click on Login;
- • Click on the entry to be changed (at the point where it gives the little popup detail description);
- • Select an option: Edit entry, Delete entry, Add to My Calendar, etc.
- • *Please note: you must be the owner to be able to edit or delete an entry in the schedule.
- d. To Edit or Cancel an Appointment –
- e. To Update Calendar - click on My Calendar.
- f. Certain times in the schedule will be reserved for maintenance / quality assurance.
- g. Allow about 2 hrs per subject for MEG (depending upon the study) and about 3 hrs for a MEG with EEG.
- III. User Log
- Users MUST document any scan that they perform in the User Log Book. If a subject was set up for the MEG but the scan was not able to be performed – that scan must still be logged in the User Log Book with a comment explaining why the study was not performed.
- Subject information and all other pertinent information must be filled out in the log book, i.e., date, PI name, operator’s initials, protocol #, subject’s initials, MIS -#, and the gantry position. Do not leave any blank entries.
- IV. Lab Safety
- 1. Equipment Operation - When performing a MEG study there must be at least two persons assisting with a study; one person must be capable of operating the equipment.
- IV. Lab Safety
- 2. Subject Safety – a subject must never be left in the MSR. The subject must be observed at all times and must never be left alone in the MSR for any reason. Two persons must be available for assistance if the subject were suddenly to take ill or if something unexpected were to happen.
- 3. Chair / Table Safety – Care should be taken when raising the chair / table when you have a subject sitting or supine in the gantry. In order to avoid injury, it is important to understand how to operate the chair and table. Operating instructions are in the MEG Policy & Procedures Manual and the CTF Users Manual. The chair has a 300 lbs. maximum weight limit and if using the bed the weight limit is around 250 lbs. maximum.
- 4. Gantry Safety – It is important to understand how to operate the gantry. Never adjust the gantry (tilt or angle) when a subject is seated in the chair or lying on the table. Instructions are available in the MEG Policy & Procedures Manual and the CTF User’s Manual.
- 5. If a medical emergency occurs call X111. For Fire or Police call 9111. For any other emergency contact the director or staff scientist for assistance at the phone numbers posted in the lab.
- V. Process Improvement / Variance Reporting
- 1. Process Improvement / User Feedback – Users may make suggestions or give feedback to the MEG staff via the Variance Process Improvement Report. Feedback may also be provided via the MEG Discussion List at MEG_DISCUSSION@LIST.NIH.GOV.
- 2. Variance Reporting – Users are responsible for reporting complications, incidents, or problems that occur involving the facility via the Variance Process Improvement Report.
- 3. Equipment Failure -Users are also responsible for reporting any equipment failure or any equipment that may not be working properly via the Variance Process Improvement Report.
- 4. Broken Equipment - Any equipment that is inoperable or broken should be tagged with an Out of Service / Do Not Use sticker indicating the date and time taken out of service. Fill out the sticker including the name of the person making the report, phone number and a brief description of the problem.
- 5. All non-urgent communications will be reported using the Variance / Process Improvement Report.
- V. Process Improvement / Variance Reporting
- VI. Magnetically Shielded Room (MSR) Guidelines
- There are no known risks associated with MEG/EEG recordings. Although wearing metal objects while in the MSR (Magnetically Shielded Room) is not harmful to the individual, bringing metal objects in the MSR can result in a poor quality / uninterruptible recording. In addition, bringing magnetized objects into the MSR can cause trapped flux in the SQUIDS which can lead to long and expensive service to fix causing obvious interruptions and scheduling delays. Thus, we have established these guidelines:
- 1. Subjects should not bring any metal objects inside the MSR. Any subject entering the MSR must first “de-metal” (remove any metal objects; empty pockets; remove jewelry, hairclips, pens, clipboards etc.). These include belts, keys, watches, rings/earrings, necklaces, coins, eyeglasses and pieces of clothing with metal parts such as bras with under wires or bras with metal adjustment rings.
- 2. No one (not subjects / nor MEG Users) should bring electrical equipment inside the MSR. Objects such as cell phones, pagers, cameras, flashlights, or any other electrical equipment are strictly forbidden.
- 3. Magnets and anything magnetized is never allowed inside the MSR by anyone.
- 4. No one should wear shoes inside the MSR. To prevent any metal or magnetic dust from getting into the MSR shoes must be removed before entering the MSR.
- 5. Any “unapproved” equipment should not be brought into the MSR. Any “special” equipment must be approved by the director or staff scientist prior to its use.
- 6. Do not use small metal objects (i.e., staples, paper clips) around the MSR.
- 7. NO equipment will be left in the MSR other than the equipment that belongs in the MSR.
Subject Guidelines
National Institute of Mental Health
Subject: |
Date: 1/03 |
Recommended By: |
Distribution: MEG Core Facility |
Procedure:
- 1. Subject Registration
- a. All subjects participating in MEG studies are required to have a valid medical record number (Medical Information System /MIS #).
- 1. Subject Registration
- b. It will be the responsibility of the principal investigator (PI) to make sure that all outpatients and control subjects have gone through the appropriate registration process and have a valid MIS#.
- c. A doctor’s order is not required for an MEG scan but a progress note must be placed in the subject’s chart indicating the nature of the scan performed, the date, time, and protocol number. The patient’s condition and general performance should also be noted. The progress must also be signed by the appropriate personnel.
- 2. Consent Forms
- a. An IRB approved consent form must be signed by all subjects prior to participating in any MEG research study.
- 2. Consent Forms
- b. Investigators are required to satisfy all Clinical Center documentation requirements.
- c. It will be the responsibility of the PI to assure that subjects have signed the appropriate consent form.
- 3. Subject Pre-Screening
- a. Although MEG/EEG poses no known risk to subjects, certain physical conditions may make subjects ineligible to participate in scanning. Some subjects will be ruled out for participation in scanning due to factors involving metallic foreign bodies which may prevent obtaining artifact free data.
- 3. Subject Pre-Screening
- b. It will be the responsibility of the PI to pre-screen subjects for the below listed contraindications during the selection process.
- Conditions That Will Rule Out a Subject:
- • Cardiac pacemaker / Cardiac or neural defibrillators
- • Metal fragments in the eyes
- • Metal plates, pins or bolts in head
- • Any magnetic implantation / implantations made from iron (ferrous products)
- Conditions That Will Rule Out a Subject:
- An Additional Consideration Which Will Rule Out a Subject:
- • Head size greater than 60 cm: if a subject’s head is too large to fit in the helmet
- An Additional Consideration Which Will Rule Out a Subject:
- 4. Subject Screening
- a. Investigators may use the MEG Screening Questionnaire and/or Handedness Form as a subject evaluation / screening tool.
- 4. Subject Screening
- b. All MEG subjects should be screened for the following items which may cause recording artifact.
- Conditions That May Rule Out a Subject:
- • Surgical aneurysm clips
- • Shrapnel
- • Intra-orbital metallic structures
- • Neurostimulator
- • Implanted pumps (i.e., Insulin pumps)
- • Steel pins from root canals; a permanent retainer
- • Ear implants (certain cochlear implants)
- • Metal rods, plates or screws in the body or mouth
- • Previous surgery (if metal was left in the body)
- • Hearing aids (should be removed before scanning)
- • Braces (causes severe artifact)
- • Tattoos (may have metallic paint)
- • Piercings (may have metallic ink)
- Conditions That May Rule Out a Subject:
- Other Considerations Which May Rule Out a Subject:
- • Head size: if a subject’s head is too fit in the helmet
- • Movement disorders (i.e., ticks, restless legs, etc., any condition that may cause excessive movement)
- • Vision / Hearing problems
- • Problems using response devices
- Other Considerations Which May Rule Out a Subject:
- c. The confidentially of the MEG Subject Screening Questionnaires and Handedness Forms will be the primary responsibility of the study’s principal investigator.
- 5. Subject Instructions
- a. Users/PI’s are responsible for giving subjects instructions prior to any scheduled procedure.
- 5. Subject Instructions
- b. Subjects should be informed not to wear these items:
- • Bras with underwires
- • Makeup (mascara, eye liner, eye shadow)
- • Clothing containing metallic (shiny) threads or glitter
- • Metal on clothing (i.e., metal buttons, snaps or trimming)
- b. Subjects should be informed not to wear these items:
- c. Subjects should be informed that metallic/magnetic items should not be taken into the Magnetically Shielded Room (MSR). These include such items as:
- • Belts
- • Keys
- • Watches
- • Coins
- • Eyeglasses
- •Cell phones
- • Pagers
- • Credit Cards
- • Small metal objects such as hair pins, paper clips, safety pins, etc.
- • Shoes (may have metallic dust particles on them)
- c. Subjects should be informed that metallic/magnetic items should not be taken into the Magnetically Shielded Room (MSR). These include such items as:
- d. It is the responsibility of the PI to inform subjects that if they arrive unprepared i.e., have metallic/magnetic parts on their clothing that cannot be easily removed, they may be asked to change into non-magnetic clothing which will be provided by staff.
- e. If there is any question about whether an object is magnetic, the object is not taken inside the MSR.
MEG / EEG (4.00)
MEG / EEG Setup Procedures
National Institute of Mental Health
Subject: |
Date: 1/03 |
Recommended By: |
Distribution: MEG Core Facility |
Procedure:
- 1. Head Size / Fit Test
- a. Determine head size by measuring the subject’s head. The Gantry head limits are:
- 1. Head Size / Fit Test
Nasion-Inion Preauricular Point to
Preauricular PointCircumference < 40 cm < 40 cm < 59 cm
- b. Determine fit by placing the MEG helmet along with a protective cap over the subject’s head.
-
MEG Sizing Helmet-front
-
MEG Sizing Helmet-side
-
- 2. Fiducial Points/Head Coil Placements
*If subject has had previous digital pictures of the fiducial points retrieve images and match placement.
- 2. Fiducial Points/Head Coil Placements
- a. Place a small black dot near the nasion (indentation between the forehead and the nose); between the eyebrows midline.
- b. Place a small black dot at the left and right preauricular points centered (about 1.5Cm) in front of the tragus. This should be measured on a straight line from the tip of the tragus to the outer canthus for accuracy.
- c. Take a digital picture of these locations, download and print Place in subject’s MEG file for future reference.
- d. Attach a small (MEG) Adhesive Washers to each head localization coil.
- e. Attach head localization coils at the fiducial marks. *Make sure the marks line up with the center of the head coils. Place the:
- f. Place tape over the coil and the cable to secure.
- MEG HEAD COIL PLACEMENTS
RIGHT
PRE-AURICULAR POINTNASION LEFT
PRE-AURICULAR POINTRed Yellow Blue
References:
- 1. NIMH MEG Core Facility Data Tutorial Manual
- 2. MEG/EEG Operation and Technical Reference Manuals, CTF Systems Inc.
EEG Easy Cap Setup Procedures
National Institute of Mental Health
Subject: |
Date: 1/03 |
Recommended By: |
Distribution: MEG Core Facility |
- Procedure:
- A. Head Size / Fit Test
- 1. Determine head size by measuring the subject’s head.
- A. Head Size / Fit Test
- 2. Select cap size: Small (< 56 cm); Medium (< 58 cm); Large (< 60cm).
- 3. Determine MEG gantry fit by placing the MEG sizing helmet along with a protective cap over the subject’s head.
- B. Measuring & Marking Head
- 1. Measure and mark FP1, FP2, FPz and Cz.
- B. Measuring & Marking Head
- C. Mounting the Cap
- 1. Rotate the adaptors in cap so that the narrow opening is toward the back of the head.
- 2. Place anchoring adhesive washer on Fp1 & Fp2.
- 3. Press Fp1 & Fp2 onto adhesive washers. Have subject hold Fp1 & Fp2 in place while turning cap over the head. Gently pull cap over the head and ears into place.
- 4. Check and adjust cap so that the Cz electrode is at the Cz mark.
- 5. Check Fp1 & FP2 and O1 & O2 to assure that they are placed correctly, if not choose another cap size.
- 6. Anchor the cap either with the chest belt or the chin strap.
- 7. Snap electrodes into the adaptors in a systematic manner starting at the back of the head. Insert so that the lead wire points towards the narrow side of the adaptor.
- 8. Push electrode into the adaptor with the fingers or with the aid of an old ballpoint pen where the mine (point) has been removed. Pay attention not to bend or place excessive pressure on the lead wire where it attaches to the electrode.
Electrode Specifications
National Institute of Mental Health
Subject: |
Date: 1/03 |
Recommended By: |
Distribution: MEG Core Facility |
For large electrode arrays the use of an electrode cap system is recommended, however, alternative methods of electrode application may be used. Additionally, electrodes can be glued or pasted to the scalp using various types of electrodes. But because of the different properties of the various metals used for electrodes careful attention should be given to the choice of electrode material. These and other factors need to be considered when choosing electrodes for any MEG/EEG application. Below are the recommendations for electrode selection:
- 1. Silver/Silver-Chloride (Ag/AgCl) electrodes are recommended to take advantage of the DC response of the EEG amplifiers.
- 2. Sintered electrodes are preferred to avoid chloriding the electrodes after every few uses.
- 3. It is recommended that the lead length be at least 1.4 meters (48 inches) to allow the amplifier to be reasonably far away from the MEG sensors.
- 4. The material in the electrodes and associated connectors should be non-magnetic.
- 5. The thickness of the EEG electrode should be minimal to avoid fitting problems in the MEG helmet.
- 6. Electrodes should have the DIN style connector.
Reference:
- 1. CTF MEG System Operation and Technical Reference Manual (P/N 900-0028), VSM MedTech Ltd.
Polhemus Digitizatin System
National Institute of Mental Health
Subject: |
Date: 1/03 |
Recommended By: |
Distribution: MEG Core Facility |
Procedure:
- 1. Mark the fiducial points (nasion, left & right preauricular points).
- 2. Take a digital picture of those points. Download to computer and print pictures.
- 3. Mount the Easy Cap on the subject. *Refer to the Easy Cap instructions.
- 4. Place the small Receiver Module at the top of the cap / head midline. Secure with tape.
- 5. Place the large transmitter on a non-metallic stand midline behind the subject. Tape the transmitter to the stand to secure.
- 6. Turn on the laptop computer:
- a. Double click on Electrode Digitizer Program. The software should detect two (2) stations if not check the connections then restart the program.
- 6. Turn on the laptop computer:
- b. In order to start - Define the Head Coordinate System.
- • Press the button on the Stylus Pen to begin.
- • To define the (head) coordinates (locate each head coil position) - Place the stylus pen tip at the center of the head coil location
(nasion, left preauricular, right preauricular) then - • Press the stylus button.
- b. In order to start - Define the Head Coordinate System.
- c. To begin Digitization – From the Laptop/Computer: Click on Digitizing Start/Stop.
- • Digitize all electrode positions by placing the stylus pen at the center of each electrode location then pressing the stylus button.
- —A single data point is collected each time the stylus button is depressed and a beep will alert the user to each acquired point.
- —The program will assign a number to the electrode position in the sequence that the electrodes are selected, I.e., 1, 2, 3, 4, etc.
- • Digitize all electrode positions by placing the stylus pen at the center of each electrode location then pressing the stylus button.
- c. To begin Digitization – From the Laptop/Computer: Click on Digitizing Start/Stop.
- • Click on Digitizing Start / Stop when done.
- • If a mistake is made:
- i) Press the stylus pen until all head coordinates have been entered then,
- ii) Press define Head Coordinates again. Do not save the previously acquired
locations simply, start over from the beginning.
- • If a mistake is made:
- d. Verify Digitization Accuracy. Review the diagram of the electrode placements which appears on the monitor. If the diagram is:
- • Correct then click on continue.
- • Not correct check to make sure that the receiver or transmitter did not move and repeat digitization.
- d. Verify Digitization Accuracy. Review the diagram of the electrode placements which appears on the monitor. If the diagram is:
- 7. Click on File / Save Menu.
- 8. Save the data to the Laptop hard drive and
- 9. Save the data to a floppy disk. The filename is the current date.
- 10. Exit the program. Eject disk. Turn off laptop.
- 11. Transfer Polhemus head coordinate file to computer at acquisition workstation / console.
- Note: The operator and anyone within 10 feet of the transmitter and receiver should de-metal. The general rule of thumb is three times the separation distance between the transmitter and receiver from any metal in the room. For example, if the separation distance is one foot, metal within three feet of the transmitter or receiver may cause distortion and inaccurate measurements.
Transferring the Polhemus Digitization File to the Acquisition Computer - 1. Insert the memory stick with the digitization file into input of the Acquisition Computer (Squid).
- 2. On the Acquisition Computer, open a new terminal window and cd to your user directory. This will be something like:
- cd users/<username>
- 3. Copy the file using mcopy:
- mcopy a:YYYYMMDD.pos
- 4. Refer to your montage file which should display the labels for the EEG electrodes
in the order in which they were digitized. This file looks something like this:- 1. fp1
- 2. fp2
- 3. f7
- 4. f3
- 5. fz
- 6. f4
- 7. f8
- and should be called: <something>.layout (e.g., “10-20.layout”).
- 5. Run the mkeeglayout.py program to create a .eeg file:
- mkeeglayout.py -l <something>.layout YYYYMMDD.pos
- 5. Run the mkeeglayout.py program to create a .eeg file:
- 6. This will create YYYYMMDD.eeg.
- 7. In Acq, click on the “Window / EEG Channel Parameters” menu.
- 8. Click on the “File / Open EEG File”, and enter the .eegfilename.
- 9. Highlight all the EEG channels by clicking and dragging.
- 10. Select “Accept New Attribute Values”.
- 11. Impedances may also be checked from this screen or Exit.
- Rev 4/12/18
Reference:
- 1. Polhemus Fastrak System (http://www.polhemus.com/fastrak.htm).
Fudicial Points Digital Images
National Institute of Mental Health
Subject: |
Date: 1/03 |
Recommended By: |
Distribution: MEG Core Facility |
Three or four views will be taken: 1) Right tragus fiducial point position; Left tragus fiducial point position; Nasion position (on the forehead between the eyebrows); and 4) subject full view (this picture is optional).
Procedure:
- 1. TURN ON THE POWER
- a. Press the power button.
- 2. FOCUSING AN IMAGE:
- a. To FOCUS / FRAME images (especially when taking close-up-shots) use the SHUTTER BUTTON.
- 2. FOCUSING AN IMAGE:
- b. Frame the picture in the IMAGE DISPLAY (for a close up; with the camera about 12 inches away from the object).
- c. Press the ZOOM IN BUTTON then
- d. Press and hold the SHUTTER BUTTON (large round silver button) halfway down to allow the camera to adjust the focus and exposure, then
- 3. TAKING A PICTURE:
- a. Press the SHUTTER BUTTON all the way down to take the picture.
- 3. TAKING A PICTURE:
- 4. VIEWING IMAGES:
- a. Press the MENU / PLAY button to turn on the image display. The last picture you took or viewed appears on the image display.
- 4. VIEWING IMAGES:
- b. Use the CONTROLLER (OK) to scroll through the images.
- c. After reviewing the images, press the PREVIEW BUTTON to turn off the image display.
- 5. UPLOADING / PRINTING images:
- a. Turn camera OFF.
- 5. UPLOADING / PRINTING images:
- b. Connect the camera via the USB cable to a computer running Windows with the HP camera software (Ebi).
- c. Turn the camera on.
- d. Open the HP Photo Imaging Software by double clicking on the icon on the desktop.
- e. Right click then select "MOUNT VOLUME".
- f. Open the DCIM folder.
- g. Open the FOLDER labelled "152_(number for the current month); Jan=1, Feb=2...
- h. Copy pictures and drag to the appropriate "USER" folder. If you don't have a user folder first create one.
- i. Rename the pictures by date taken (Example, 20151201a, 20151201b, 20151201c, etc.
- j. Deletes all pictures from the Camera - if you delete the pictures from the DCIM Folder this will delete your pictures from the camera.
- k. Right click to UNMOUNT the volume.
- l. Unplug the camera.
- m. Turn off camera.
- n. Log out of the computer.
- 6. PRINTING IMAGES:
- a. Select pictures to be printed.
- b. Right Click then sleect OPEN with --> PhotoPrint. Or Left Click on FILE then --> Select Open with PhotoPrint.
- c. Click on FILE then --> /Select PRINT SETUP.
- d. Select "COLOR" as the printer (the HP Laserjet Printer near the Stimulus Computer).
EEG Impedance Check on the MEG System
National Institute of Mental Health
Subject: |
Date: 1/03 |
Recommended By: |
Distribution: MEG Core Facility |
After the electrodes are attached to the subject’s scalp / electrode cap placed, the electrode impedance(s) will be checked to ensure good contact. The impedances measured should only be used to judge scalp contact and should not be considered a precise measure of actual impedance. Ideal impedances for scalp electrodes typically range from 1-5kohms. Impedances for other non-cerebral electrodes ideally should be < 50kohms.
Procedure:
- 1. Attach electrodes to the scalp / place cap.
- 2. Touch the static discharge button before connecting electrodes or cap connector jig to the amplifier unit. Connect the electrodes or electrode cap to the amplifier unit.
- 3. Launch ACQ - Run the appropriate EEG program.
- 4. Select the EEG Setup Window menu.
- 5. Highlight desired channels.
- 6. Click on CHECK IMPEDANCE.
- a. The results are displayed in the appropriate columns.
- b. To check the impedance of all active EEG channels, press the CTRL key on the keyboard at the same time as clicking on the impedance check button.
- c. Please note: The impedance check requires 3 electrodes: The electrode being measured and at least 2 other electrodes.
- 7. Click OK / EXIT.
Reference:
- 1. Data Acquisition Manual, p/n 900-0006, CTF Systems Inc. (www.ctf.com).
EEG Impedance Check using the Grass Impedance Meter
National Institute of Mental Health
Subject: |
Date: 1/03 |
Recommended By: |
Distribution: MEG Core Facility |
An external impedance check should be performed on all electrodes used for EEG, EOG or EMG using the Grass S88 Impedance Meter. The Grass Impedance Meter measures AC impedance (resistance and capacitance). When two or more electrodes are plugged into the electrode switch positions, all electrodes except the one selected electrode being measured are connected and provide the reference for the one being measured.
To perform an Impedance Check, at least two electrodes are required to be plugged in to the impedance meter.
Procedure:
- 1. The Electrode Selector Switch should be at position 1 - 10.
- 2. Plug the ground electrode (Grd) into electrode jack 1 position.
- 3. Plug the other electrode(s) into the jack positions 2 - 10 in a systematic manner.
- 4. Press the Red ON Button to activate the impedance check. *The power will automatically shutoff after approximately 2 minutes. (There is no OFF button.)
- 5. If the impedance is too high:
- a. Take a cotton tip swab dipped in Nuprep (Abralyt or other skin prep) and twirl against the skin.
- b. Re-insert electrolyte.
- c. Re-measure impedance.
- d. Repeat this process until all impedances are within acceptable levels.
- 5. If the impedance is too high:
- Impedance Recommendations
EEG Electrodes 5-10K ohms EMG Electrodes (EOG, ECG, etc.) < 50K ohms
- 6. If the impedance exceeds 199.9K ohm, a “1” will appear in the left display window with all other digits blanked out indicating that the impedance is too high to be read:
- a. Take a cotton tip swab dipped in Nuprep (Abralyt or other skin prep) and twirl against the skin.
- b. Re-insert electrolyte.
- c. Re-measure impedance.
- d. Repeat this process until all impedances are within acceptable levels.
- 6. If the impedance exceeds 199.9K ohm, a “1” will appear in the left display window with all other digits blanked out indicating that the impedance is too high to be read:
Reference:
1. Grass EZM Electrode Impedance Meter Instructions Manual, Grass Instrument Division, Astro-Med, Inc.
Magnetically Shielded Room (MSR) & Subject Support (5.00)
Magnetically Shielded Room (MSR)
National Institute of Mental Health
Subject: |
Date: 1/03 |
Recommended By: |
Distribution: MEG Core Facility |
I. MSR Room Lighting
- Turning on the lights in the MSR:
- Depress the square green button on the VAC Power Supply Unit which is located on the bottom shelf of the equipment stand outside the MSR.
- Dimming the lights in the MSR:
- Use the Brightness (black) knob to dim the light.
- Turning on the lights in the MSR:
II. MSR Door Operation
- Closing the Door:
- 1. Push the door up to the door frame as far as possible.
- 2. Press the OPEN/CLOSE BUTTON (Black Button) until the air locks activate and the door begins to close then quickly release the button to seal the door.
- Closing the Door:
- Opening the Door:
- 1. Press the OPEN/CLOSE BUTTON (Black Button) until the air locks release and the door begins to open then quickly release the button.
- 2. Pull the door open.
- Opening the Door:
- Door Emergency Operation:
- 1. Emergency Door Open Button - If the door fails to open, press the EMERGENCY OFF BUTTON (red button) located on the wall outside of the MSR. There is also an EMERGENCY OFF BUTTON located on the inside of the MSR door.
- 2. Emergency Door Open Key - If the door fails to open when using the Emergency Off Button, then insert the EMERGENCY DOOR KEY in the upper and lower Emergency Unlock (yellow) keyholes and turn. This will manually release the door locks. Keys and keyholes are located on both sides of the MSR door.
- Door Emergency Operation:
III. MSR Monitors
- A. Oxygen Monitor
- The Safetnet Oxygen Monitor which is mounted in the MEG Lab on the wall just outside the MSR measures the percentage of oxygen in the MEG lab which may be an indication of the air exchange in the MSR and/or the general integrity of the Dewar and related equipment. Refer to Policy No. 10.15 Daily System Monitors / Quality Assurance.
- B. He Gas Flow Meter
- The Gilmont Gas Flow Meter is located inside the MSR mounted on the back left wall. It monitors the MEG Dewar helium level or rate of Helium boil off which gives an indication of the general integrity of the MEG Dewar and related equipment. Refer to Policy No. 10.15 Daily System Monitors / Quality Assurance.
- C. Liquid Helium Level
- The AMI Model 135 Liquid Helium Level Monitor which is located on the stand just outside the MSR measures the amount of helium inside the MEG Dewar. Refer to Policy No. 10.15 Daily System Monitors / Quality Assurance.
References:
- 1. VacuumSchmelze.
- 2. MEG/EEG Operation and Technical Reference Manuals, CTF Systems Inc. (www.ctf.com).
Gantry Operation
National Institute of Mental Health
Subject: |
Date: 1/03 |
Recommended By: |
Distribution: MEG Core Facility |
There are two Gantry controls which are located on the side of the Gantry base: 1) the Brake Lever and 2) the Tilt Control Lever. The Gantry controls have been designed so that the operator is required to use two hands to operate. The Brake Lever and the Tilt Control Lever must be engaged more-or-less at the same time.
- Please note:
- • Pulling up on the Brake Lever turns on the power and releases the brake.
- Please note:
- • Releasing the brake lever allows the brake turns off the power and engages / locks the brake.
- • The Tilt Control Lever is OFF when in the center position.
Procedure:
To re-position / move the Gantry - lift the Brake Lever and hold it in the up position then:
- 1. If raising the gantry,
- a. While still holding the Brake Lever in the release (up) position, lift the Tilt Control Lever handle until the brake is released. You might hear a click or feel the pressure release. Maintain this position until the desired angle of tilt is reached.
- b. As the Tilt Control Lever handle is lifted further the gantry will begin to rise faster.
- c. When the angle of tilt is reached first release the Tilt Control Lever and then release the Brake Lever.
- 2. If lowering the gantry,
- a. While still holding the Brake Lever in the release (up) position, lift the Tilt Control Lever handle to raise the gantry up a few degrees until you hear the click or the Dewar begins to move in the upward direction. This action will release the brake then allow the gantry to lower.
- b. Then push the Lever in the downward direction. Pushing the Tilt Control Lever handle down will cause the gantry to lower.
- 4. Returning the Tilt Control Lever to the center “OFF” position will cause the gantry motion to slow to a stop.
- 5. Release the brake lever allowing it to go back to the horizontal position to turn off the power and engage / lock the brake.
- Gantry Recording Positions
Sitting Position 15 degrees Supine Position 90 degrees Reclined Position at various degrees of tilt
References: 1. MEG/EEG Operation and Technical Reference Manuals, CTF Systems Inc. (www.ctf.com).
Stimulus / Response / Monitoring Equipment (6.00)
DLP Projector
National Institute of Mental Health
Subject: |
Date: 1/03 |
Recommended By: |
Distribution: MEG Core Facility |
Data Acquisition / Data Analysis (7.00)
Data Acquisition
National Institute of Mental Health
Subject: |
Date: 10/03 |
Recommended By: |
Distribution: MEG Core Facility |
The Acquisition Computer controls all aspects of electronics, tuning, aquisition and data storage. The Acquisition Computer is configured with CTF's Omega software.
Infection Prevention / Control (9.00)
Infection Control / Universal Precautions
National Institute of Mental Health
Subject: |
Date: 1/03 |
Recommended By: |
Distribution: MEG Core Facility |
Quality Assurance / Risk Management (10.00)
QA /QI Risk Management Plan
National Institute of Mental Health
Subject: |
Date: 1/03 |
Recommended By: |
Distribution: MEG Core Facility |
to pursue opportunities for improvement. The quality of services provided will be identified by predetermined, validated and/or approved criteria, indicators, standards, practice
guidelines, and/or parameters which are objective, measurable, based on current knowledge, research practice and/or experience and defined within institutional, departmental
and laboratory policies and procedures.
Procedure:
STEP I. ASSIGN RESPONSIBILITY |
- Identify the principle person responsible for administering the program and others team members’ responsibilities.
STEP II. DEFINE THE TYPES OF SERVICES PROVIDED – |
- Identify the types of services.
STEP III. DELINEATED SCOPE OF SERVICES - |
- Identify groups / clientele serviced and staff responsibilities / duties in providing services.
STEP IV. DETERMINE IMPORTANT ASPECTS OF CARE - |
- Identify broad categories of areas of interest, opportunities for improvement, problems or areas of concerns.
STEP V. IDENTIFY INDICATORS – |
- Indicators - are problems or concerns. Identify specific components of care (problems or concerns) to be studied based upon written criteria, standards, guidelines,
and parameters of care or services, relevant to the essential or critical aspects of care or services.
- - They can be used to review staff performance, systems processes, practices, supplies, equipment, facility conditions, etc.
- - They can be drawn from standards of professional practice, significant changes in occurrence, size, or scope in the results of care or services
:provided and facility standards; institute policies and procedures; standards developed by professional organizations; standards established by
:accreditation organizations.
- Indicators - are problems or concerns. Identify specific components of care (problems or concerns) to be studied based upon written criteria, standards, guidelines,
- Criteria - are predetermined measurable elements used as a basis for establishing standards.
- Standards - are professionally developed expressions of the measure of acceptable variation from a given norm or criteria.
STEP VI. DETERMINE THRESHOLD LEVELS FOR INDICATORS - |
- Threshold is the beginning or starting point of an evaluation of care and/or service triggered by exceeding pre-established indicators, criteria.
STEP VII. COLLECT AND IDENTIFY DATA - |
- Tabulate, summarize and where appropriate statistical analysis will be performed on the select aspects of service for a specified period of time. Once tabulated, data will be considered as “fact” for the purposes of the study.
STEP VII. EVALUATE AND ANALYZE DATA / IDENTIFY DEFICIENCIES - |
- A. Determine Appropriateness - The study should answer questions such as: Are studies being conducted appropriately? To answer questions relating to the study proper benchmarks must be constructed which correctly identify efficacious procedures, optimal outcomes or ideal organization.
- B. Evaluate and Revise Criteria - Criteria are used to measure the extent to which the actual delivery of service conforms to the optimal delivery of service. The criteria used in evaluation studies should attempt to establish the parameters of legitimate medical or clinical conduct in relation to a particular problem, population, modality or program.
- C. Evaluate Data - Appraise and assess data.
- D. Identify Deficiencies - Recognize opportunities for improvement and categorize deficiencies.
STEP VIII. INSTITUTE CORRECTIVE ACTION / INTERVENTIONS / PLAN OF ACTION - |
- A. Personnel deficiency problem:
- 1. Lack of knowledge → education.
- 2. Lack of skill → training.
- 3. Attitudes in relation to task → education / training / discipline.
- 4. Lack of adequate staffing → hiring / re-allocation of manpower or duties.
- A. Personnel deficiency problem:
- B. Program deficiency problem:
- 1. Structure.
- 2. Policy.
- 3. Procedure.
- B. Program deficiency problem:
- C. Organizational deficiency problems:
- 1. Structure.
- 2. Policy.
- 3. Procedure.
- C. Organizational deficiency problems:
STEP IX. OUTCOME OF CORRECTIVE ACTION TAKEN / ASSESS OR MONITOR THE IMPACT - |
- The impact of the corrective action will be observed via the Variance process. At a reasonable time after corrective action is completed, Variance reports will be reviewed to determine that appropriate changes have occurred. Re-audits will be done whenever there is an overall average of less than 85% compliance.
Training & Education (11.00)
Compliance (12.00)
Quality Assurance Manual
This manual contains information on the MEG Core Facility Quality Assurance - Quality Improvement / Risk Management Program. These programs monitor and evaluate the quality of services provided in order to pursue opportunities for improvement. This manual is currently under development.
Tutorials
Here is some tutorial documentation that has been compiled as a complement to the information available on the website. Some of the topics are covered in more depth in these manuals, although the information on the website may be more current.
MEG Data Acquisition Tutorial (last updated 8/22/03), update coming soon)
MEG Data Acquisition Tutorial (last updated 8/22/03), update coming soon)
MEG Data Analysis Tutorial (last updated 8/13/03, update coming soon)
MEG Data Analysis Tutorial (last updated 8/13/03, update coming soon)
How To Instructions
These are instructions or handouts which cover various different topics pertinent to the performance of MEG scans and/or data analysis.
*MEG Fiducial Placement Instructions *
MEG Fiducial Placement Instructions
Octave Class
Tom gave a short tutorial on switching from Matlab to Octave. Here are the class notes: Octave class (MS PowerPoint Presentation) This reflects versions 2.9.10 of Octave. Also, here are two sample scripts:
*anything.m *
mkmesh.m
Miscellaneous Documentation
SensLayout-275 — a color picture showing the sensor names and relative locations (ps).
SensLayout-275 - a color picture showing the sensor names and relative locations (pdf).