MEG training course 2023

From MEG Core
Revision as of 09:43, 11 August 2023 by Jstout (talk | contribs) (→‎Dates:)
Jump to navigation Jump to search

!!!Under Construction!!!

Dates:

09/27/2023 & 10/04/2023

Location:

FAES classroom
Building 10 - Rooms 1&2

Things to do before the course

Install the required installations for your computer (see below)
Get a biowulf account:

 Full Link: https://hpc.nih.gov/docs/accounts.html 
 Direct Link: https://hpcnihapps.cit.nih.gov/auth/accounts/account_request.php

Confirm that you can log into biowulf with a terminal (mac / linux) or powershell (windows) after account approval!!

Required Installs:

SSH terminal:

 Windows: powershell (included) or MobaXterm(Windows)
 Mac : terminal (included)
 Linux : terminal (included)

NoMachine:

 ALL: https://www.nomachine.com/

Recommended Installs:

Afni:

 ALL: https://afni.nimh.nih.gov/pub/dist/doc/htmldoc/background_install/main_toc.html

freesurfer:

 #Download and sign up for a free license
 Windows: None
 Mac: https://surfer.nmr.mgh.harvard.edu/fswiki/DownloadAndInstall
 Linux: https://surfer.nmr.mgh.harvard.edu/fswiki/DownloadAndInstall

Miniconda (NOT ANACONDA):

 #Find your operating system and run (possibly in a terminal)
 ALL: https://docs.conda.io/en/latest/miniconda.html

Git:

 Windows: https://github.com/git-for-windows/git/releases/tag/v2.41.0.windows.3
 Mac: Have Xcode installed on system or https://git-scm.com/download/mac
 Linux: (ubuntu: sudo apt-get install git) (redhat: sudo dnf install git)

Format: