Source Localization - SAM: Difference between revisions
Jump to navigation
Jump to search
Content added Content deleted
No edit summary |
(add 3dNormalize documentation) |
||
| (7 intermediate revisions by one other user not shown) | |||
| Line 14: | Line 14: | ||
=== Documentation: === |
=== Documentation: === |
||
* [[SAMsrcV3 overview | SAMsrcV3 overview]] |
|||
* [[Installation Instructions | Installation Instructions]] |
* [[Installation Instructions | Installation Instructions]] |
||
* [[Suggested Pipelines | Suggested Pipelines]] |
* [[Suggested Pipelines | Suggested Pipelines]] |
||
* [[Tunable Parameters | Tunable Parameters]] |
|||
* Program Reference Pages |
* SAM Program Reference Pages |
||
** [[sam_cov | sam_cov]] |
** [[sam_cov | sam_cov]] |
||
** [[sam_coreg | sam_coreg]] |
|||
** [[sam_wts | sam_wts]] |
** [[sam_wts | sam_wts]] |
||
** [[sam_nwts | sam_nwts]] |
** [[sam_nwts | sam_nwts]] |
||
** [[sam_3d and sam_3dc | sam_3d and sam_3dc]] |
|||
** [[sam_4d and sam_4dc | sam_4d and sam_4dc]] |
|||
** [[sam_ers and sam_ersc | sam_ers and sam_ersc]] |
|||
** [[sam_power | sam_power]] |
|||
** [[sam_epi | sam_epi]] |
|||
** [[patch_wts | patch_wts]] |
|||
** [[roi_wts | roi_wts]] |
|||
** [[sam_entropy | sam_entropy]] |
|||
** [[mut_img | mut_img]] |
|||
* SAM Utility Program Reference Pages |
|||
** [[orthohull.py | orthohull.py]] |
|||
** [[FSnormals.py | FSnormals.py]] |
|||
** [[NIFTIPeak | NIFTIPeak]] |
|||
** [[3dNormalize | 3dNormalize]] |
|||
Latest revision as of 14:52, 30 September 2020
Synthetic Magnetometry: The SAMsrcV3 Analysis Suite
The programs documented here implement the latest advances in MEG source localization. Compared with the older CTF tools, there are many new features (some of them experimental).
Features include:
- Flexible control over active, control, and noise covariance matrices
- Dual-state ERF imaging
- Realistic head models
- Hilbert envelope time series computation for connectivity
- Experimental refinement of MRI coregistration based on Freesurfer normals
- More efficient workflow
- Command-line interface for maximal flexibility
Documentation:
- SAMsrcV3 overview
- Installation Instructions
- Suggested Pipelines
- Tunable Parameters
- SAM Program Reference Pages
- SAM Utility Program Reference Pages