Difference between revisions of "Suggested Pipelines"

From MEG Core
Jump to navigation Jump to search
Line 12: Line 12:
{{#mermaid:graph LR
{{#mermaid:graph LR
subgraph MRI Preprocessing
subgraph MRI Preprocessing
MRI["Structural MRI"] --> fids["Place Fiducial"];
MRI["Structural MRI"] --> fids["Place Fiducials"];
MRI["Structural MRI"] --> shape["Register point clouds"];
MRI["Structural MRI"] --> shape["Register point clouds"];
fids --> hull["Process with orthohull"];
fids --> hull["Process with orthohull"];

Revision as of 10:07, 20 March 2019

Master Pipeline

Basic MRI Pre-Processing Workflow

  1. Create covariance matrices using sam_cov.
  2. Compute beamformer weights with sam_wts.
  3. sam_3d uses the weights to compute volumetric images of activity estimates.
  4. View them with AFNI.
  5. It didn't work, go back and try again.
  6. Nope, still didn't work, try this instead.