MNE Python Tutorial 2021: Difference between revisions
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=Download the sample data= |
=Download the sample data= |
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== NIMH Users: Download here == |
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scp <USERNAME>@helix.nih.gov:/data/NIMH_scratch/mne_tutorial/mne_tutorial.tar.gz <NEW PATH> |
scp <USERNAME>@helix.nih.gov:/data/NIMH_scratch/mne_tutorial/mne_tutorial.tar.gz <NEW PATH> |
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cd <NEW PATH> |
cd <NEW PATH> |
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tar -xvf mne_tutorial.tar.gz |
tar -xvf mne_tutorial.tar.gz |
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== NON-NIH MEG Users: Download from MEG Data server == |
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The data is located on the MEG data server and is accessible by all users with accounts |
The data is located on the MEG data server and is accessible by all users with accounts |
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An email will be sent with the path to the data |
An email will be sent with the path to the data |
Revision as of 12:27, 24 September 2021
Steps to prepare prior to tutorial
Prepare python environment
IF YOU DO NOT HAVE MINICONDA/ANACONDA INSTALLED - have IT install miniconda under your user account conda install -n base mamba -c conda-forge -y mamba create -n mne conda-forge::mne main::pip main:jupyter -y
conda activate mne
Download the sample data
NIMH Users: Download here
scp <USERNAME>@helix.nih.gov:/data/NIMH_scratch/mne_tutorial/mne_tutorial.tar.gz <NEW PATH> cd <NEW PATH> tar -xvf mne_tutorial.tar.gz
NON-NIH MEG Users: Download from MEG Data server
The data is located on the MEG data server and is accessible by all users with accounts An email will be sent with the path to the data
Start Jupyter Notebook
cd <NEW PATH>/nimh_tutorial_data jupyter notebook mne_tutorial_10_01_21.ipynb