MEG training course 2023: Difference between revisions

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Full Link: https://hpc.nih.gov/docs/accounts.html
Full Link: https://hpc.nih.gov/docs/accounts.html
Direct Link: https://hpcnihapps.cit.nih.gov/auth/accounts/account_request.php
Direct Link: https://hpcnihapps.cit.nih.gov/auth/accounts/account_request.php
Confirm that you can log into biowulf after account approval!!
Confirm that you can log into biowulf with a terminal (mac / linux) or powershell (windows) after account approval!!


== Required Installs: ==
== Required Installs: ==

Revision as of 16:01, 3 August 2023

!!!Under Construction!!!

Dates:

09/??/2023

Location:

FAES classroom ---

Things to do before the course

Install the required installations for your computer (see below)
Get a biowulf account:

 Full Link: https://hpc.nih.gov/docs/accounts.html 
 Direct Link: https://hpcnihapps.cit.nih.gov/auth/accounts/account_request.php

Confirm that you can log into biowulf with a terminal (mac / linux) or powershell (windows) after account approval!!

Required Installs:

SSH terminal:

 Windows: powershell (included) or MobaXterm(Windows)
 Mac : terminal (included)
 Linux : terminal (included)

NoMachine:

 ALL: https://www.nomachine.com/

Recommended Installs:

Afni:

 ALL: https://afni.nimh.nih.gov/pub/dist/doc/htmldoc/background_install/main_toc.html

freesurfer:

 #Download and sign up for a free license
 Windows: None
 Mac: https://surfer.nmr.mgh.harvard.edu/fswiki/DownloadAndInstall
 Linux: https://surfer.nmr.mgh.harvard.edu/fswiki/DownloadAndInstall

Miniconda (NOT ANACONDA):

 #Find your operating system and run (possibly in a terminal)
 ALL: https://docs.conda.io/en/latest/miniconda.html

Git:

 Windows: https://github.com/git-for-windows/git/releases/tag/v2.41.0.windows.3
 Mac: Have Xcode installed on system or https://git-scm.com/download/mac
 Linux: (ubuntu: sudo apt-get install git) (redhat: sudo dnf install git)

Format: