Suggested Pipelines: Difference between revisions
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== Basic Synthetic Aperture Magnetometry Workflow == |
== Basic Synthetic Aperture Magnetometry Workflow == |
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{{#mermain:graph LR |
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hull --> ortho["Processed MRI"]; |
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}} |
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{{#mermaid:graph LR |
{{#mermaid:graph LR |
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marks --> Covariance; |
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filter --> meg; |
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end |
end |
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meg[MEG Data] --> Filter[Band-pass<br>filter]; |
meg[MEG Data] --> Filter[Band-pass<br>filter]; |
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Filter --> Covariance; |
Filter --> Covariance; |
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end |
end |
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{{#mermaid:graph LR |
{{#mermaid:graph LR |
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subgraph |
subgraph Synthetic Aperture Magnetometry |
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Markers --> Beamformer; |
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Covariance --> Beamformer; |
Covariance --> Beamformer; |
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ortho[Processed MRI] --> Beamformer; |
ortho[Processed MRI] --> Beamformer; |
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Revision as of 11:17, 2 March 2019
Basic Synthetic Aperture Magnetometry Workflow
{{#mermain:graph LR subgraph MRI Preprocessing
MRI["Structural MRI"] --> hull(process with orthohull); hull --> ortho["Processed MRI"];
end }}
- Create covariance matrices using sam_cov.
- Compute beamformer weights with sam_wts.
- sam_3d uses the weights to compute volumetric images of activity estimates.
- View them with AFNI.
- It didn't work, go back and try again.
- Nope, still didn't work, try this instead.