Difference between revisions of "Suggested Pipelines"

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Line 28: Line 28:
subgraph MEG Preprocessing
subgraph MEG Preprocessing
raw[Raw MEG data] --> filter[Basic Filtering];
raw[Raw MEG data] --> filter[Basic Filtering];
adc[Raw ADC data] --> ThresholdDetect;
adc[Raw ADC/PPT<br>data] --> ThresholdDetect;
ThresholdDetect --> marks[Create Markers];
ThresholdDetect --> marks[Create Markers];
filter --> meg[MEG Data];
filter --> meg[MEG Data];
Line 49: Line 49:


{{#mermaid:graph LR
{{#mermaid:graph LR
subgraph SAM
subgraph SAM Workflow
sam_cov --> sam_wts;
sam_cov --> sam_wts;
sam_wts --> sam_3d;
sam_wts --> sam_3d;

Revision as of 12:11, 2 March 2019

Basic Synthetic Aperture Magnetometry Workflow

  1. Create covariance matrices using sam_cov.
  2. Compute beamformer weights with sam_wts.
  3. sam_3d uses the weights to compute volumetric images of activity estimates.
  4. View them with AFNI.
  5. It didn't work, go back and try again.
  6. Nope, still didn't work, try this instead.