Difference between revisions of "Suggested Pipelines"

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Line 16: Line 16:
fids --> hull["Process with orthohull"];
fids --> hull["Process with orthohull"];
shape --> hull;
shape --> hull;

hull --> ortho["Processed MRI"];
style hull fill:#fcf
style hull fill:#fcf
click hull "https://megcore.nih.gov/index.php/Head_Localization_and_MRI_Coregistration" "orthohull documentation"
click hull "https://megcore.nih.gov/index.php/Head_Localization_and_MRI_Coregistration" "orthohull documentation"
end
end


subgraph Head Model
subgraph MultiSphere
ortho --> MultiSphere;
hull --> MultiSphere;
ortho --> Nolte;
MultiSphere --> localSpheres;
end

subgraph Nolte
hull --> Nolte;
end
end
}}
}}

Revision as of 15:35, 19 March 2019

Master Pipeline

Basic Synthetic Aperture Magnetometry Workflow

  1. Create covariance matrices using sam_cov.
  2. Compute beamformer weights with sam_wts.
  3. sam_3d uses the weights to compute volumetric images of activity estimates.
  4. View them with AFNI.
  5. It didn't work, go back and try again.
  6. Nope, still didn't work, try this instead.