Suggested Pipelines: Difference between revisions
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{{#mermaid:graph LR |
{{#mermaid:graph LR |
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subgraph MRI Preprocessing |
subgraph MRI Preprocessing |
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MRI["Structural MRI"] --> |
MRI["Structural MRI"] --> fids["Place Fiducial"]; |
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MRI["Structural MRI"] --> shape["Register point clouds"]; |
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fids --> hull["Process with orthohull"]; |
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shape --> hull; |
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hull --> ortho["Processed MRI"]; |
hull --> ortho["Processed MRI"]; |
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style hull fill:#fcf |
style hull fill:#fcf |
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click hull "https://megcore.nih.gov/index.php/Head_Localization_and_MRI_Coregistration" "orthohull documentation" |
click hull "https://megcore.nih.gov/index.php/Head_Localization_and_MRI_Coregistration" "orthohull documentation" |
Revision as of 15:33, 19 March 2019
Master Pipeline
Basic Synthetic Aperture Magnetometry Workflow
- Create covariance matrices using sam_cov.
- Compute beamformer weights with sam_wts.
- sam_3d uses the weights to compute volumetric images of activity estimates.
- View them with AFNI.
- It didn't work, go back and try again.
- Nope, still didn't work, try this instead.