Suggested Pipelines: Difference between revisions
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style hull fill:#fcf,stroke:#333,stroke-width:1px |
style hull fill:#fcf,stroke:#333,stroke-width:1px |
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click hull "https://megcore.nih.gov/index.php/Head_Localization_and_MRI_Coregistration" "orthohull documentation" |
click hull "https://megcore.nih.gov/index.php/Head_Localization_and_MRI_Coregistration" "orthohull documentation" |
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end |
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subgraph Head Model |
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ortho --> MultiSphere; |
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ortho --> Nolte; |
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end |
end |
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}} |
}} |
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Markers --> Beamformer; |
Markers --> Beamformer; |
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Covariance --> Beamformer; |
Covariance --> Beamformer; |
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head[Head Model] --> Beamformer; |
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Beamformer --> image["3D Images"]; |
Beamformer --> image["3D Images"]; |
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end |
end |
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style sam_cov fill:#fcf,stroke:#333,stroke-width:1px |
style sam_cov fill:#fcf,stroke:#333,stroke-width:1px |
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click sam_cov "https://megcore.nih.gov/index.php/Sam_cov" " |
click sam_cov "https://megcore.nih.gov/index.php/Sam_cov" "sam documentation" |
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style sam_wts fill:#fcf,stroke:#333,stroke-width:1px |
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click sam_wts "https://megcore.nih.gov/index.php/Sam_wts" "sam documentation" |
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style sam_3d fill:#fcf,stroke:#333,stroke-width:1px |
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click sam_3d "https://megcore.nih.gov/index.php/Sam_3d" "sam documentation" |
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style AFNI fill:#fcf,stroke:#333,stroke-width:1px |
style AFNI fill:#fcf,stroke:#333,stroke-width:1px |
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click AFNI "https://afni.nimh.nih.gov/" "The AFNI website" |
click AFNI "https://afni.nimh.nih.gov/" "The AFNI website" |
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Revision as of 12:43, 2 March 2019
Basic Synthetic Aperture Magnetometry Workflow
- Create covariance matrices using sam_cov.
- Compute beamformer weights with sam_wts.
- sam_3d uses the weights to compute volumetric images of activity estimates.
- View them with AFNI.
- It didn't work, go back and try again.
- Nope, still didn't work, try this instead.