Meg information based connectivity coding session: Difference between revisions

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Revision as of 13:47, 9 August 2022

!Under Construction - will be finalized by Friday!

We will be meeting virtually over Zoom from 1pm-3pm with breakout rooms for questions and collaboration
There will be a quick discussion/demo (10-20mins) and some example data on biowulf.

FRITES toolbox-

 Club MEG Presentation Recording
 Background
 Getting Started Scripts
 Example Scripts

Install in new environment (RECOMMENDED!):

 conda create -n frites conda-forge::mne conda-forge::jupyterlab pip -y 
 conda activate frites
 pip install frites

 git clone https://github.com/brainets/CookingFrites.git
 cd CookingFrites
 jupyter lab
 #Once jupyter is open, the notebooks are in the notebooks folder

Install in current environment (Better to use New environment as listed above!)-

 #Download getting started tutorials
 git clone https://github.com/brainets/CookingFrites.git
 pip install frites

SAM Information Based Connectivity - (tutorial will be formalized by Friday) Club MEG Presentation Recording

@@ Line 5: / Line 5: @@
 FRITES toolbox-
+  [https://megcore.nih.gov/MEG/FRITES_Tutorial_07132022.mp4  Club MEG Presentation Recording]
   [https://brainets.github.io/frites/    Background]
   [https://github.com/brainets/CookingFrites   Getting Started Scripts]
@@ Line 17: / Line 18: @@
   cd CookingFrites
   jupyter lab
+  #Once jupyter is open, the notebooks are in the notebooks folder
 Install in current environment (Better to use New environment as listed above!)-
@@ Line 26: / Line 28: @@
 SAM Information Based Connectivity - (tutorial will be formalized by Friday)
+[https://megcore.nih.gov/MEG/Robinson_InformationTheoryMEG_ClubMEG_03102022.mp4  Club MEG Presentation Recording]

Meg information based connectivity coding session: Difference between revisions

Revision as of 13:47, 9 August 2022

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