Meg information based connectivity coding session: Difference between revisions

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==SAM Information Based Connectivity - (tutorial will be formalized by Friday)==
==SAM Information Based Connectivity - (tutorial will be formalized by Friday)==
[https://megcore.nih.gov/MEG/Robinson_InformationTheoryMEG_ClubMEG_03102022.mp4 Club MEG Presentation Recording]
[https://megcore.nih.gov/MEG/Robinson_InformationTheoryMEG_ClubMEG_03102022.mp4 Club MEG SAM Connectivity Presentation Recording]

Revision as of 14:25, 9 August 2022

!Under Construction - will be finalized by Friday!

We will be meeting virtually over Zoom from 1pm-3pm with breakout rooms for questions and collaboration
There will be a quick discussion/demo (10-20mins) and some example data on biowulf.

FRITES toolbox

Club MEG Presentation Recording

 Background
 Getting Started Scripts
 Example Scripts

Install in new environment (RECOMMENDED!):

 conda create -n frites conda-forge::mne conda-forge::jupyterlab pip -y 
 conda activate frites
 pip install frites
 git clone https://github.com/brainets/CookingFrites.git
 cd CookingFrites
 jupyter lab
 #Once jupyter is open, the notebooks are in the notebooks folder

Install in current environment (Better to use New environment as listed above!)-

 #Download getting started tutorials
 git clone https://github.com/brainets/CookingFrites.git
 pip install frites

SAM Information Based Connectivity - (tutorial will be formalized by Friday)

Club MEG SAM Connectivity Presentation Recording