MNE Python Tutorial 2021

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Revision as of 12:18, 24 September 2021 by Jstout (talk | contribs) (→‎Steps to prepare prior to tutorial)

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Steps to prepare prior to tutorial

Prepare python environment

 IF YOU DO NOT HAVE MINICONDA/ANACONDA INSTALLED -  have IT install miniconda under your user account
 
 conda install -n base mamba -c conda-forge -y  
 mamba create -n mne conda-forge::mne main::pip main:jupyter -y

 conda activate mne

Download the sample data

 scp <USERNAME>@helix.nih.gov:/data/NIMH_scratch/mne_tutorial/mne_tutorial.tar.gz <NEW PATH>
 cd <NEW PATH>
 tar -xvf mne_tutorial.tar.gz

Start Jupyter Notebook

 cd <NEW PATH>/nimh_tutorial_data
 jupyter notebook mne_tutorial_10_01_21.ipynb

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