Difference between revisions of "MNE Python Tutorial 2021"
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(Initial) |
m (Instructions for download) |
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| Line 7: | Line 7: | ||
conda activate mne | conda activate mne | ||
mamba install -c conda-forge mne -y | mamba install -c conda-forge mne -y | ||
| − | mamba install jupyter pip | + | mamba install jupyter pip -y |
| + | |||
| + | =Download the sample data= | ||
| + | scp <USERNAME>@helix.nih.gov:/data/NIMH_scratch/stoutjd/nimh_tutorial_data.tar.gz <NEW PATH> | ||
| + | cd <NEW PATH> | ||
| + | tar -xvf nimh_tutorial_data.tar.gz | ||
| + | |||
| + | =Start Jupyter Notebook= | ||
| + | cd <NEW PATH>/nimh_tutorial_data | ||
| + | jupyter notebook mne_tutorial_10_01_21.ipynb | ||
Revision as of 16:07, 23 September 2021
Steps to prepare prior to tutorial
Prepare python environment
IF YOU DO NOT HAVE MINICONDA/ANACONDA INSTALLED - have IT install miniconda under your user account conda install mamba -y conda create -n mne conda activate mne mamba install -c conda-forge mne -y mamba install jupyter pip -y
Download the sample data
scp <USERNAME>@helix.nih.gov:/data/NIMH_scratch/stoutjd/nimh_tutorial_data.tar.gz <NEW PATH> cd <NEW PATH> tar -xvf nimh_tutorial_data.tar.gz
Start Jupyter Notebook
cd <NEW PATH>/nimh_tutorial_data jupyter notebook mne_tutorial_10_01_21.ipynb