Analysis AWS

From MEG Core
Revision as of 20:08, 30 October 2019 by Jstout (talk | contribs)
Jump to navigation Jump to search
  1. Under Construction


  1. Server Config
    1. google > fedora aws > select the AMI number for N.Virginia
    2. In AWS > launch instance > search for AMI number > (Under community) > Launch
      1. https://alt.fedoraproject.org/cloud/
  2. Determine an image (search for fedora in community)
  3. Create a keypair and download the key
    1. The download will be in the form of a .pem file
    2. We will need to distribute this key to the users
  4. Launch the instance
  5. Log into the instance using ssh


Conda installed Conda deactivate >> hnn Conda activate nih >> mne or eelbrain.....


  1. Freesurfer
  2. MNE python
  3. pyctf

Done # SAM v5

  1. Afni ###INSTALL ME neurodebian
  2. singularity ? >> CTF (need to use workstation version of fedora) << may need to compile for ubuntu or use 2.6
  3. Eelbrain (conda forge)
  4. Jupyter

Done# Forward sim HNN software

  1. FSL ###Install outside of neurodebian
  2. Brainstorm (compiled)


Matlab Based

  1. Brainstorm
  2. Fieldtrip