Difference between revisions of "Analysis AWS"

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#Launch the instance
 
#Launch the instance
 
#Log into the instance using ssh
 
#Log into the instance using ssh
  +
  +
  +
Conda installed
  +
Conda deactivate >> hnn
  +
Conda activate nih >> mne or eelbrain.....
   
   
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# MNE python
 
# MNE python
 
# pyctf
 
# pyctf
# SAM v5
+
Done # SAM v5
  +
# Afni ###INSTALL ME neurodebian
# Afni
 
# singularity ? >> CTF (need to use workstation version of fedora)
+
# singularity ? >> CTF (need to use workstation version of fedora) << may need to compile for ubuntu or use 2.6
 
# Eelbrain (conda forge)
 
# Eelbrain (conda forge)
 
# Jupyter
 
# Jupyter
# Forward sim HNN software
+
Done# Forward sim HNN software
  +
# FSL ###Install outside of neurodebian
# FSL
 
 
# Brainstorm (compiled)
 
# Brainstorm (compiled)
 
<br>
 
<br>

Revision as of 20:08, 30 October 2019

  1. Under Construction


  1. Server Config
    1. google > fedora aws > select the AMI number for N.Virginia
    2. In AWS > launch instance > search for AMI number > (Under community) > Launch
      1. https://alt.fedoraproject.org/cloud/
  2. Determine an image (search for fedora in community)
  3. Create a keypair and download the key
    1. The download will be in the form of a .pem file
    2. We will need to distribute this key to the users
  4. Launch the instance
  5. Log into the instance using ssh


Conda installed Conda deactivate >> hnn Conda activate nih >> mne or eelbrain.....


  1. Freesurfer
  2. MNE python
  3. pyctf

Done # SAM v5

  1. Afni ###INSTALL ME neurodebian
  2. singularity ? >> CTF (need to use workstation version of fedora) << may need to compile for ubuntu or use 2.6
  3. Eelbrain (conda forge)
  4. Jupyter

Done# Forward sim HNN software

  1. FSL ###Install outside of neurodebian
  2. Brainstorm (compiled)


Matlab Based

  1. Brainstorm
  2. Fieldtrip