https://megcore.nih.gov/index.php?action=history&feed=atom&title=MNE_biowulf 2026-05-18T07:16:54Z Revision history for this page on the wiki MediaWiki 1.44.2 https://megcore.nih.gov/index.php?title=MNE_biowulf&diff=4595&oldid=prev 2021-08-05T20:49:22Z

<p>Created page with &quot;UNDER CONSTRUCTION ====Set up environment for processing==== Log into biowulf Start tmux session Start sinteractive or spersist w/tunnel flag: example: sinteractive --m...&quot;</p> <p><b>New page</b></p><div>UNDER CONSTRUCTION<br /> <br /> ====Set up environment for processing====<br /> Log into biowulf<br /> Start tmux session<br /> Start sinteractive or spersist w/tunnel flag: <br /> example: sinteractive --mem=8G --cpus-per-task=4 --gres=lscratch:5 --tunnel<br /> start another login to biowulf with the appropriate port forwarding (the instructions should be listed when sinteractive starts)<br /> <br /> ====Load ====<br /> Start the mne session<br /> module load singularity<br /> export SINGULARITY_BINDPATH=&quot;/data/$USER,/fdb,/scratch,/lscratch&quot;<br /> singularity exec mne-python-jupyter_main.sif jupyter lab --port $PORT1<br /> <br /> <br /> <br /> ====For admin setup====<br /> # From the mne docker website -- https://github.com/mne-tools/mne-docker<br /> singularity pull docker://ghcr.io/mne-tools/mne-python-jupyter:main</div>

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